Number of Reads | 438,712,280 |
Valid Barcodes | 97.4% |
Sequencing Saturation | 94.1% |
Q30 Bases in Barcode | 97.4% |
Q30 Bases in RNA Read | 86.4% |
Q30 Bases in UMI | 97.6% |
Reads Mapped to Genome | 94.4% |
Reads Mapped Confidently to Genome | 90.7% |
Reads Mapped Confidently to Intergenic Regions | 17.0% |
Reads Mapped Confidently to Intronic Regions | 14.8% |
Reads Mapped Confidently to Exonic Regions | 58.9% |
Reads Mapped Confidently to Transcriptome | 55.0% |
Reads Mapped Antisense to Gene | 0.7% |
Estimated Number of Cells | 4,067 |
Fraction Reads in Cells | 76.8% |
Mean Reads per Cell | 107,871 |
Median Genes per Cell | 702 |
Total Genes Detected | 19,801 |
Median UMI Counts per Cell | 1,935 |
Name | GeekGene_NC |
Description | |
Transcriptome | hg19 |
Chemistry | Single Cell 3' v2 |
Cell Ranger Version | 2.2.0 |
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